Application-based courses and workshops for researchers. Bioinfomatics Core Training Bioinformatics training costs 1-day workshop £100 2-day workshop £150 July 2024 Command Line Bioinformatics - 1 day Date: tbc Venue: tbc Capacity: tbc Registration: tbc Introduction to the Unix command line environment. Bioinformatics data analysis with command line tools. Writing shell scripts for bioinformatics analysis. October 2024 Analysing high throughput sequencing data - 2 days Date: tbc Venue: tbc Capacity: tbc Registration: tbc Day 1: Align sequencing reads to a reference genome. Using an RNA-seq example, you will perform quality control, adapter trimming, alignment, post-alignment filtering and visualise read coverage on a genome browser. Day 2: Analysis of specific datatypes e.g. HiC, ChIP-seq, methyl-seq. November 2024 Introduction to statistics - 1 day Date: tbc Venue: tbc Capacity: tbc Registration: tbc Seminar and practical exercise introducing basic statistical concepts and experimental design in biology: Probability distributions, hypothesis testing, experimental design. Introduction to R programming - 2 days Date: tbc Venue: tbc Capacity: tbc Registration: tbc Introduction to R and RStudio. Statistical analysis with R. Data manipulation and plotting. Genomic data with R. December 2024 RNA-Seq Data Analysis - 2 Days Date: tbc Venue: tbc Capacity: tbc Registration: tbc Combining command line tools and R programming to process RNA-seq reads and perform differential expression analysis. April 2025 Python for Biology - 2 days Date: tbc Venue: tbc Capacity: tbc Registration: tbc Introduction to the Python programming language, Jupyter Lab and using Python packages to process genomic and sequencing data. Further information Bioinformatics training Light Microscopy Core Training Light Microscopy training costs 4-day workshop £200 November 2024 Advanced Microscopy course - 4 days Date: 4 - 7 November Venue: tbc Capacity: 20 Registration: Opens Monday 7 October The course combines theory and practical sessions covering Brightfield, Fluorescence and Confocal microscopy, and Image analysis, as well as more advanced methods including Total Internal Reflection Fluorescence Microscopy (TIRFM), Super Resolution Microscopy, Correlative Light and Electron Microscopy and the C-Trap Optical Tweezers. Proteomics Core Training Proteomics training costs 1-day workshop £100 2-day workshop £150 October 2024 Proteomics Core Training Course - 2 days Date: tbc Venue: tbc Capacity: 25 Registration: Registration will open in September 2024 The course combines theory and practical sessions covering introduction to instrumentation, sample preparation, basics of mass spectrometry, quantative proteomics and cross-linking. Computational practicals provide training on proteomics software (MaxQuant and DIA-NN) for analysis of mass spectrometry acquired data, advanced computational analysis and interpretation of proteomics datasets and processing of cross‐linking data, including use of the Xi viewer for visualisation of cross-links. April 2025 Proteomics Core Training Course - 2 days Date: tbc Venue: tbc Capacity: 25 Registration: Registration will open in March 2025 The course combines theory and practical sessions covering introduction to instrumentation, sample preparation, basics of mass spectrometry, quantative proteomics and cross-linking. Computational practicals provide training on proteomics software (MaxQuant and DIA-NN) for analysis of mass spectrometry acquired data, advanced computational analysis and interpretation of proteomics datasets and processing of cross‐linking data, including use of the Xi viewer for visualisation of cross-links. Structural Biology Core Training Structural Biology training costs Introduction to CryoEM - free, registration required Introduction to the Structural Biology Core - free, registration required Bespoke training on core equipment, prices tbc. October 2024 Introduction to CryoEM Date: tbc Venue: tbc Capacity: 20 Registration: Registration will open in September 2024 This course provides an introduction to EM and cryo-EM methods, including sample preparation, microscope capabilities, limitations and future developments, and discussion of the local facility. April 2025 Introduction to the Structural Biology Core Date: tbc Venue: tbc Capacity: 20 Registration: Registration will open in March 2024 This course introduces the technologies available within the Structural Biology Core, including X-ray crystallography and solution methods such as light and X-ray scattering (MALS and SAXS). This article was published on 2024-06-17
